Function reference • microbiomedataset

All functions
`activate_microbiome_dataset()`	activate_microbiome_dataset
`check_microbiome_dataset()`	check_microbiome_dataset
`check_microbiome_dataset_class()`	check_microbiome_dataset_class
`convert2microbiome_dataset()` `as.microbiome_dataset()`	convert to microbiome_dataset class object.
`convert2phyloseq()` `as.phyloseq()`	convert to phyloseq class object.
`convert2tbl_graph()` `as.tbl_graph()`	convert to tbl_graph class object in tidygraph.
`convert2treedata()` `as.treedata()`	convert data.frame contained hierarchical relationship or other classes to treedata class
`create_microbiome_dataset()`	create_microbiome_dataset
`extract_otu_tree()` `extract_taxa_tree()` `extract_ref_seq()`	extract_otu_tree
`extract_intensity()`	extract_intensity
`get_microbiomedataset_version()`	get_microbiomedataset_version
`global_patterns` `GlobalPatterns`	(Data) Global patterns of 16S rRNA diversity at a depth of millions of sequences per sample (2011)
`left_join_microbiome_dataset()`	Left join for microbiome_dataset
`microbiome_dataset-class`	microbiome_dataset class
`microbiomedataset_conflicts()`	Conflicts between the microbiomedataset and other packages
`microbiomedataset_logo()`	microbiomedataset_logo
`microbiomedataset_packages()`	List all packages in the microbiomedataset
`mutate2sample()`	Mutate new columns into sample_info
`mutate2variable()`	Mutate new columns into variable_info
`plot_barplot()`	Barplot based on ggplot2
`summarise_samples()` `summarize_samples()`	merge samples
`summarise_variables()` `summarize_variables()`	merge samples
`transform2relative_intensity()`	transform data to relative data

Reference

All functions