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microbiome_dataset class

Source: R/class_microbiome_dataset.R
microbiome_dataset-class.Rd

microbiome_dataset class

Slots

otu_tree

A treedata object of tidytree package or NULL.

taxa_tree

A treedata object of tidytree package or NULL.

otu_tree_link

A data.frame linking variable_id to otu_tree nodes.

taxa_tree_link

A data.frame linking variable_id to taxa_tree nodes.

ref_seq

A XStringSet object of Biostrings package or NULL.

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Other slots from mass_dataset class object in massdataset pacakge