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microbe_metabolite_network class

Source: R/class_microbiome_dataset.R
microbe_metabolite_network-class.Rd

microbe_metabolite_network class

Slots

node_data

A data.frame of network nodes.

edge_data

A data.frame of network edges.

method

Correlation method used to derive the network.

microbiome_rank

Taxonomic level used for microbiome features.

thresholds

A list describing edge filtering thresholds.