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Summarize Pathway-Level Mechanisms

Source: R/analysis_crossomics.R
summarise_pathways.Rd

Aggregate mechanism evidence from taxon-metabolite links to pathway-level summaries, optionally incorporating taxon-to-pathway mappings.

Usage

summarise_pathways(mechanism_result, taxon_pathway_link = NULL)

Arguments

mechanism_result

A crossomics_mechanism object.

Optional taxon-to-pathway link table.

Value

A pathway summary data.frame.